Navigating the Global Bioinformatics Database Ecosystem: A Practical Taxonomy
From primary archival repositories (NCBI, EBI, DDBJ) to curated structural and pathway atlases: where modern biological data lives and how it connects.
YOGYAKARTA, INDONESIA
Engki Nandatama
COMPUTATIONAL BIOLOGIST.RESEARCH ENGINEER.SCIENCE COMMUNICATOR.
I study biological systems, build computational tools, and communicate science.
Driven by curiosity. Grounded in rigor.
Observe. Understand. Build. Share.
Explore my work
Research
Understanding life through computation. From genomics to public health, I explore biological questions using data and methods.
Engineering
Building tools that empower research. Open-source software, pipelines, and automations for science.
def design_primers(sequence, target, task='general', tm_min=57.0, tm_max=63.0): config = load_config() result = primer3.bindings.designPrimers({ 'SEQUENCE_ID': target, 'SEQUENCE_TEMPLATE': sequence, 'PRIMER_TASK': task, 'PRIMER_OPT_TM_MIN': tm_min, 'PRIMER_OPT_TM_MAX': tm_max, }, config) return resultWriting
Thoughts, notes, and ideas on science, code, and the process behind discovery.
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About
I'm Engki, a computational biologist and research engineer based in Yogyakarta, Indonesia.
I love turning complex biological data into meaningful insights and building tools that make research more efficient and accessible.
When I'm not coding or analyzing data, you'll find me in the lab, writing, or exploring nature with my camera.